Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 1414431 1414746 316 82 [0] [0] 125 intR integrase

Only 100 of 125 total aligned reads displayed.

GACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGCTC  >  W3110S.gb/1414747‑1414810
|                                                               
gACTGGGGAAAACGTCTTAAATACTCATATTCACCGGAGTTTa                       >  1:626043/1‑43 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCg                              >  1:1746319/1‑36 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGa                            >  1:1585284/1‑38 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTa           >  1:1036360/1‑55 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:499979/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1787231/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:498126/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:466373/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:441988/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:42826/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:407826/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:392460/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:38722/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:335799/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:277024/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:269953/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:213000/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:194389/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1859432/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1841005/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1835849/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1834999/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:180699/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:984659/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:66889/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:100082/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:920148/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:864232/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:848006/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:839273/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:827980/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:768709/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:759232/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:749489/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:724388/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:510945/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:616696/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:601820/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:587822/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:581970/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:570166/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:561616/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:556517/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:537973/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:530221/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:516181/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1411932/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1470772/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1461785/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1459158/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1452003/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1439091/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1437644/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1254032/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1413802/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1478128/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1409889/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1383095/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1364586/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1348269/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1317511/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1334916/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:132820/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1327177/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1178671/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:177984/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1706418/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1705741/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1055981/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:165196/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:164953/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1646778/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1135654/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1498621/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1199920/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1606362/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1203070/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1597804/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1507161/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGctc  >  1:1210254/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:1240215/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:919523/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:943459/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:761791/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:1052586/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:698175/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:609724/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:1422543/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:522342/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:455889/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:1502817/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:375312/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:318483/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:1610717/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:1643651/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:1877695/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:167873/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGct   >  1:1767110/1‑63 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCACGAACTATCAGCGctc  >  1:858573/1‑64 (MQ=255)
gACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTGATTTCATGAACTATCAGCGctc  >  1:1839201/1‑64 (MQ=255)
|                                                               
GACTGGGGAAAACGTCTTAAATACTCAAATTCACCGGAGTTTATTTCATGAACTATCAGCGCTC  >  W3110S.gb/1414747‑1414810

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑