Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1460063	1460571	509	38 [0]	[0] 75	paaG	acyl‑CoA hydratase

CGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGA  >  W3110S.gb/1460572‑1460636 |                                                                 cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:237929/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:479133/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:468388/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:447557/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:398037/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:336528/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:327394/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:316806/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:279873/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:251924/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:490147/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:23008/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:228089/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:219451/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1872210/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1848869/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:182523/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1782851/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1772193/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:818174/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:934561/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:91590/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:91101/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:909153/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:863664/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:863383/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:863024/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:843403/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1759500/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:712207/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:702541/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:693122/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:643191/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:634295/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:56281/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:518898/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:513611/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1281564/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1064108/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1564767/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1524297/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1452657/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1444033/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1364554/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1357268/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1354592/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1338276/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1568739/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1265743/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1259631/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:12310/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1202364/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1191928/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1184632/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1119213/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1080144/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1588651/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1756757/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1754742/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1754098/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1748009/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1735882/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1730259/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1708277/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1705248/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1680323/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1668172/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1658177/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1645753/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1642358/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1624276/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1588928/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCGGa  <  1:242361/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGGCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:1350044/65‑1 (MQ=255) cGGCATCTGGCGACACAACCGACATTTGGGCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGa  <  1:15751/65‑1 (MQ=255) |                                                                 CGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGA  >  W3110S.gb/1460572‑1460636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑