Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1559883	1560256	374	122 [0]	[0] 69	ddpD	D‑Ala‑D‑Ala transporter subunit

CTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCCAGC  >  W3110S.gb/1560257‑1560321 |                                                                 cTGAAAGCTCAAACGGATAGCGCGTCATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1050084/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:61682/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1761837/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1798391/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:18274/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:183787/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1853473/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1866951/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1880971/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:278899/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:32965/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:363042/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:409526/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:461813/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:462002/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:471159/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1765548/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:67972/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:679742/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:703181/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:74541/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:755381/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:759850/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:761842/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:798588/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:810393/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:857903/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:896384/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:913224/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:927533/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:97108/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:995669/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1182806/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1312135/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1288936/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1281741/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1268787/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1234543/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1208661/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1201917/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1199689/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1676737/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1180743/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1180424/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1179173/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1146540/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1138961/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1084287/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1076116/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:151083/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1708510/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1645021/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1643691/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1585684/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1566523/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1549220/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1512876/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1361695/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1495999/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1436769/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1436256/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1428021/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1427419/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcagc  >  1:1411223/1‑65 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcag   >  1:408906/1‑64 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcag   >  1:838332/1‑64 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcag   >  1:1794582/1‑64 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCcag   >  1:502581/1‑64 (MQ=255) cTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCca    >  1:585796/1‑63 (MQ=255) |                                                                 CTGAAAGCTCAAACGGATAGCGCGACATAACTTCCACGGCATCCGGGATTTGCATCTCTTCCAGC  >  W3110S.gb/1560257‑1560321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑