Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	114962	115152	191	32 [0]	[0] 41	hofC	assembly protein in type IV pilin biogenesis, transmembrane protein

ATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTAA  >  W3110S.gb/115153‑115217 |                                                                 atagCGGCTAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATAGCAATCGCTaa  >  1:1704821/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGGTTGCCATCGc     >  1:275806/1‑62 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCAt        >  1:1791188/1‑59 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCt    >  1:610629/1‑63 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:632882/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:272274/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:346666/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:421680/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:428676/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:459847/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:6003/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:233933/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:658887/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:705898/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:765759/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:783849/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:8120/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:862108/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:945773/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:973313/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:977043/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:993258/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:1505140/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:101161/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:1169392/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:1203588/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:1206532/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:1248687/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:1390028/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:1497812/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:265633/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:1521127/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:161927/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:183154/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:1840195/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:1861793/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:21586/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTaa  >  1:1010224/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTa   >  1:1203318/1‑64 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACAACCATGATTGCCATCGCTaa  >  1:1679187/1‑65 (MQ=255) atagCGGCAAACTCCGGCAGAACAAAATGCAGCATTGACACAACCACCATGATTGCCATCGCTaa  >  1:1189251/1‑65 (MQ=255) |                                                                 ATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACCATGATTGCCATCGCTAA  >  W3110S.gb/115153‑115217

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑