Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 1966707 1967323 617 99 [0] [0] 104 [flhA]–[flhB] [flhA],[flhB]

Only 100 of 104 total aligned reads displayed.

CAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCA  >  W3110S.gb/1967324‑1967388
|                                                                
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:313985/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:453527/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:43991/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:439724/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:436479/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:424363/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:390736/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:389336/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:369989/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:36566/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:353017/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:333775/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:322359/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:506965/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:30898/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:300723/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:290314/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:271885/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:266151/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:253763/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:245452/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:221202/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:211636/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:204695/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:200001/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:717999/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:967440/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:934822/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:91641/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:878945/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:867060/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:846930/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:846767/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:801073/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:784588/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:779735/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:773663/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:729976/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:198750/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:707018/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:693068/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:686741/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:671740/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:648744/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:640341/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:62799/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:58437/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:572533/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:570303/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:524777/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1207560/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1349962/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1336408/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1335379/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1319840/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1318234/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1296576/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1285549/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1284382/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1273827/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1273822/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1241085/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1211976/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1370417/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1189545/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1178656/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:116968/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1130776/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1103451/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1085329/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1077306/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:105709/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1054808/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1011745/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1008907/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:151327/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:18901/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:182407/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1781247/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:171380/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1700520/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1624685/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1599749/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1598619/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1589733/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1588388/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1567735/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1564837/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1004107/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1498893/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1493142/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1490797/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1488124/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:14661/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1451829/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1434323/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1415941/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1404264/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1384596/65‑1 (MQ=255)
cagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCa  <  1:1379795/65‑1 (MQ=255)
|                                                                
CAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCA  >  W3110S.gb/1967324‑1967388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑