Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1985228	1985956	729	2 [1]	[0] 76	[araH]–[araG]	[araH],[araG]

TCTTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAG  >  W3110S.gb/1985957‑1986021 |                                                                 tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTg                                >  1:1625614/1‑35 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTgaga               >  1:93609/1‑52 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGa      >  1:1083558/1‑61 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATc    >  1:1190884/1‑63 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCa   >  1:1530280/1‑64 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCa   >  1:467507/1‑64 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:584827/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:610514/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:533471/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:49609/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:433225/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:386882/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:328348/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:315294/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:248067/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:228755/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:219971/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1864512/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1858851/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1846533/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1831781/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1808901/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:73237/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:979697/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:950003/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:898952/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:872079/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:859706/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:800209/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:795328/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:775959/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:601096/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:7161/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:708641/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:705067/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:669277/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:656905/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:627737/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:612589/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1786714/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1213856/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:179375/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1339654/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1336866/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1290236/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1275314/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1262018/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1247186/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1224460/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1347923/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1167449/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1156591/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1107071/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1093774/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1087261/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1071907/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1028213/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:100376/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:165092/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1000626/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1782804/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1743204/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1706209/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:165676/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1373298/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1601804/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1590343/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:156786/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1561921/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1528880/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1497228/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1481999/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTCATTTCCGCCACAGACATTCATGATCAg  >  1:365820/1‑65 (MQ=255) tctTCCGATAACCAGCGGCCCAGAATGGCTTCTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1686521/1‑65 (MQ=255) tctTCCGATAACCAGCAGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAg  >  1:1068361/1‑65 (MQ=255) tctACCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTgaga               >  1:1752186/1‑52 (MQ=255) |                                                                 TCTTCCGATAACCAGCGGCCCAGAATGGCTTTTTGCTGATTTCCGCCTGAGAGATTCATGATCAG  >  W3110S.gb/1985957‑1986021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑