Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2016368	2016405	38	3 [0]	[0] 46	fliF	flagellar basal‑body MS‑ring and collar protein

GCGTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCAAA  >  W3110S.gb/2016406‑2016469 |                                                                gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCg                         >  1:211630/1‑41 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGAt                       >  1:1835298/1‑43 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCAc                  >  1:496245/1‑48 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:643288/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:206036/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:264022/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:326535/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:363034/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:424897/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:460241/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:460941/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:486457/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:971186/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:663804/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:696114/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:718249/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:743526/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:77435/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:835237/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:871470/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:893963/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:936247/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:962931/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1010311/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1448385/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1053262/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1094302/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:115884/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1162746/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1175307/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1216109/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1246816/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1308915/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1313960/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:144762/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1779690/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1532483/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1547699/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1553982/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1582539/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1665678/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1673863/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:167876/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1706589/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaaa  >  1:1761149/1‑64 (MQ=255) gcgTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCaa   >  1:1611003/1‑63 (MQ=255) |                                                                GCGTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCAAA  >  W3110S.gb/2016406‑2016469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑