Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2125187	2125217	31	2 [0]	[0] 90	cpsG/cpsB	phosphomannomutase/mannose‑1‑phosphate guanyltransferase

CGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCGG  >  W3110S.gb/2125218‑2125282 |                                                                 cGTTTACACCCGTCCGTAGCGATTCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1667274/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:34491/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:585927/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:578187/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:558605/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:558489/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:555831/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:555640/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:495933/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:467034/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:455558/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:442533/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:420825/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:608191/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:299253/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1882156/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:188111/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:187351/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:187125/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1871067/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1783042/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1748431/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1717698/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:781055/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:978902/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:948998/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:930923/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:913119/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:867097/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:861759/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:860036/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:842242/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:831828/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:788326/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1717485/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:742081/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:724518/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:71194/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:685167/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:679009/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:660366/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:654927/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:652617/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:647244/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:626872/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1129413/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1437154/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:137205/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1361640/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1339981/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:125019/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1196462/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1194971/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1188199/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1183953/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1148175/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1147798/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1437896/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1104108/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1099043/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1072590/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1072344/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1071327/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1066132/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1064382/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1055247/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1030969/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1029854/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1593533/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1701985/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1699251/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1683829/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1678185/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1668421/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1648933/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1642885/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1618572/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1610540/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1594132/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1016186/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1591180/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1578976/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1527559/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1488042/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1471298/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1448355/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:144755/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1445324/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgg  <  1:1444012/65‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCgc  <  1:542468/65‑2 (MQ=255) |                                                                 CGTTTACACCCGTCCGTAGCGATCCGCGAAACGCACCACATCATCCTCTTCGAGATAAGAGCCGG  >  W3110S.gb/2125218‑2125282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑