Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2165910	2165941	32	42 [0]	[0] 56	baeS	sensory histidine kinase in two‑component regulatory system with BaeR

AGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCA  >  W3110S.gb/2165942‑2166006 |                                                                 aGCACCGGTAGTTTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:538062/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGgcggcg                       >  1:699798/1‑44 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCTAACGATTCGCCa  >  1:746110/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGcc   >  1:1841496/1‑64 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGcc   >  1:1164799/1‑64 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGcc   >  1:18712/1‑64 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGcc   >  1:1537336/1‑64 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1886404/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:202109/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:268578/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:601947/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:315215/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:335023/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:38243/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:416283/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:503435/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1862132/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:521078/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1853685/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:606074/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:625314/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:644780/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:716207/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:739327/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:748358/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:789466/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:896803/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:899951/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:91907/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:951574/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1370926/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:101595/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1033224/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1041192/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1086000/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1160112/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1223342/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1229226/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1266555/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1287869/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1315339/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1326399/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1333343/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1856198/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1387837/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1428061/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:147688/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1545735/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1562032/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1625168/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1652240/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1660837/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1714663/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1009637/1‑65 (MQ=255) aGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTAGCGAACGATTCGcc   >  1:1488067/1‑64 (MQ=255) aGCACCGGTAGAGTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCa  >  1:1695968/1‑65 (MQ=255) |                                                                 AGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCA  >  W3110S.gb/2165942‑2166006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑