Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2323607	2323865	259	126 [0]	[0] 66	rcsC	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN

CTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAT  >  W3110S.gb/2323866‑2323930 |                                                                 cTGCTCGACACCCAAAAGCGCCTGCTACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:36097/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCATATAAACTGGCGTCAACGCGTAAAAAt  >  1:993888/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGc                  >  1:1054469/1‑49 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTc               >  1:838510/1‑52 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaaaaa   >  1:348240/1‑64 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaaaaa   >  1:1010985/1‑64 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaaaaa   >  1:1831689/1‑64 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaaaaa   >  1:1822502/1‑64 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaaaaa   >  1:1669257/1‑64 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaaaaa   >  1:455695/1‑64 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaaaaa   >  1:1249641/1‑64 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaaaaa   >  1:1056918/1‑64 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaa      >  1:1311128/1‑61 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:453656/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:274326/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:992429/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:365777/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:978619/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:407933/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:409118/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:430407/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:881555/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:432987/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:447975/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:880106/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:788597/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:822285/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:506313/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:586973/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:627838/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:659473/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:688846/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:715397/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:75872/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:768062/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:816807/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:786868/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1522829/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1012849/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:104190/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1057933/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1098864/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1106482/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1132398/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1140166/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:124096/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1246596/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1318250/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1412699/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1506529/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:325229/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:156561/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1568820/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1570156/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1579528/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:161776/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1747115/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:180426/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:1828851/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:241131/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:269711/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:300045/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:305334/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGCCCGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:5400/1‑65 (MQ=255) cTGCTCGACACCCAAAAGCGACTGCAACCGGTTCGCCAGATaa                        >  1:1035798/1‑43 (MQ=255) cTGCTAGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt  >  1:145566/1‑65 (MQ=255) |                                                                 CTGCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAT  >  W3110S.gb/2323866‑2323930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑