Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2366713	2366789	77	22 [0]	[0] 75	yfaX	predicted DNA‑binding transcriptional regulator

ATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAG  >  W3110S.gb/2366790‑2366854 |                                                                 aTCGTCGCAGCACTACTGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:776378/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTga                        >  1:1101910/1‑43 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGcc          >  1:1826891/1‑57 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGc           >  1:1609653/1‑56 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTc    >  1:1166795/1‑63 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:351218/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:562459/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:66536/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:1541120/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:1513934/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:681043/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:742015/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:1480803/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:304860/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:1344938/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:1006123/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:873111/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:889064/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:1159937/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCa   >  1:1050128/1‑64 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:479234/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:463200/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:499721/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:542109/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:546881/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:362369/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:342571/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:552687/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:741170/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:566658/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:584412/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:648935/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1755418/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:743129/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:757864/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:785185/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:79176/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:817798/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:908437/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:936668/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:983997/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:986494/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:997908/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:151307/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1026053/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1030873/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1047658/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1061770/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1168172/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1259409/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1296204/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1317192/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1330371/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1379705/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1394551/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1425130/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1458234/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1482388/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1841140/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1554330/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1579533/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1593632/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1665421/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1673141/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1675133/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1681231/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:170333/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1728034/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1741420/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1756898/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1759841/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1784447/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:178509/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATAGAGAATATCAATAGCCCGTGTCAg  >  1:1484274/1‑65 (MQ=255) aTCGTCGCAGCACTACAGGGGCCAATCCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAg  >  1:1619954/1‑65 (MQ=255) |                                                                 ATCGTCGCAGCACTACAGGGGCCAATGCGGGCAATCAAATTGAGAATATCAATAGCCCGTGTCAG  >  W3110S.gb/2366790‑2366854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑