Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2412458	2412662	205	20 [0]	[0] 56	insA/yfbQ	IS1 element protein/predicted aminotransferase

CACCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCATT  >  W3110S.gb/2412663‑2412727 |                                                                 cacaTCGGAAATCATCCCGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATcgc          >  1:37650/1‑57 (MQ=255) cacCTCGGAAATCATCACGCAGTTTAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1577719/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAACCTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:116478/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAGTGAGGAAATATCATCATCGCGTTTCAtt  >  1:374849/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATatcatc               >  1:945413/1‑52 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:315933/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1088043/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:365419/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:434926/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:496200/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:54581/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:609322/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:610279/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:646568/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:649493/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:662040/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:702807/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:724639/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:747629/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:772072/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:798561/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:835821/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:842908/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:893045/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:918328/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:93335/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:951452/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:951904/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1884506/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1012717/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:109887/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1142934/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1301631/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:13561/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:136664/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1424331/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1450971/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1467025/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1467499/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1583957/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1636128/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1649329/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:167809/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1681487/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1701626/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1757603/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1760496/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1761891/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1796237/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1814061/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:1815171/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAtt  >  1:272856/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAt   >  1:1488861/1‑64 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCAt   >  1:1423333/1‑64 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATAATCATCGCGTTTCAtt  >  1:954697/1‑65 (MQ=255) cacCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAACATCATCATCGCGTTTCAtt  >  1:513272/1‑65 (MQ=255) |                                                                 CACCTCGGAAATCATCACGCAGTTAAACTCTCCGTAATGAGGAAATATCATCATCGCGTTTCATT  >  W3110S.gb/2412663‑2412727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑