Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2469800	2469924	125	13 [0]	[0] 69	vacJ	predicted lipoprotein

TCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAG  >  W3110S.gb/2469925‑2469989 |                                                                 tCAGCCAGGAAAGAACCGGTTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1499137/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAACACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1066543/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCGCGCAGCGTGAAg  <  1:199363/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGTAg  <  1:243549/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:528902/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:599491/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:518090/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:501661/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:49854/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:489056/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:430175/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:428925/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:417851/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:402242/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:379616/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:377091/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:265576/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:204369/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:748840/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:979242/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:956401/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:951655/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:92700/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:882984/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:846113/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:802838/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:759781/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:557028/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:745998/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:711076/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:706251/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:682265/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:667805/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:636039/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:19392/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1162535/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1014476/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1391780/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:136963/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1334541/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:132991/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1324713/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1282059/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1232869/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1407877/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1150067/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1142086/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1133948/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1049477/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1043714/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1036108/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1025083/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1748199/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:188594/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1842386/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1836802/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1836604/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1793452/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1755104/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1425438/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1713564/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1660469/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1637922/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1600871/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1597372/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1594070/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:1448878/65‑1 (MQ=255) tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGCGAAg  <  1:804299/65‑1 (MQ=255) tCAGCCAGGAAAGAACCAGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg  <  1:354374/65‑1 (MQ=255) |                                                                 TCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAG  >  W3110S.gb/2469925‑2469989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑