Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2487740	2487749	10	124 [0]	[0] 75	emrK	EmrKY‑TolC multidrug resistance efflux pump, membrane fusion protein component

CAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCC  >  W3110S.gb/2487750‑2487814 |                                                                 cAATGTCTTCGTTCTTCGTATCTATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1745905/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATAc                >  1:1406225/1‑51 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAggg         >  1:781250/1‑58 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGgt       >  1:818947/1‑60 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:481344/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:627084/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:616352/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:574933/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:558182/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:525183/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:52254/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:518254/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:493007/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:486731/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:628844/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:442833/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:432296/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:371141/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:305311/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:303187/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:293662/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:765750/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:982853/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:972816/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:873850/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:871544/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:801922/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:798369/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:797794/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:772358/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:292894/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:764505/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:752094/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:741853/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:724967/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:659151/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:655545/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:630827/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:269482/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1053886/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1102899/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:110413/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1109178/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:115153/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1169586/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1175948/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1194208/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1231992/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1251346/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:125633/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1261656/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1285000/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1353896/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1361348/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1431194/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1021738/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:268717/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:191622/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:182218/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1743495/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1740617/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1710787/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1581263/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1526466/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1506552/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1466560/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1450366/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1435844/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1366762/1‑65 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTc   >  1:1562089/1‑64 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTc   >  1:131690/1‑64 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTc   >  1:923263/1‑64 (MQ=255) cAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACCCAAg           >  1:746493/1‑56 (MQ=255) cAATGTCTTCGTCCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc  >  1:1029648/1‑65 (MQ=255) cAATGTCTTCGTACTTCGTATCAAAAGTTGCAGACAACGATaa                        >  1:105334/1‑43 (MQ=255) |                                                                 CAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCC  >  W3110S.gb/2487750‑2487814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑