Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4159446	4159514	69	54 [1]	[0] 52	kefG	component of potassium effux complex with KefB

GCGCACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAGGTGATT  >  W3110S.gb/4159383‑4159451                                                               |       gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:646469/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1008450/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:509774/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:512848/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:518009/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:522713/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:529119/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:576750/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:580303/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:587443/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:607290/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:610703/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:635638/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:46043/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:686928/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:687583/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:706576/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:775652/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:806537/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:810825/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:869564/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:945845/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:946583/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:949383/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:964025/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:98393/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1326198/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1058153/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1105915/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1124297/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1130242/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1147597/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1177271/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:119607/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1243269/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1263124/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1264567/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1314425/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:353480/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1331213/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1475401/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1495890/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1509600/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1532880/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1562715/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1568328/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1568992/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:281241/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:338480/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAGGTggga  >  1:63506/1‑66 (MQ=255) gcgcACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGAGCGAGCACGAg        >  1:779686/1‑63 (MQ=255) gcgcACTATCCCGATTTTTTTATAGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:1137633/1‑63 (MQ=255) gcgcACTATCCCGAGTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:196420/1‑63 (MQ=255) gcgcACAATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAg        >  1:341/1‑63 (MQ=255)                                                               |       GCGCACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAGGTGATT  >  W3110S.gb/4159383‑4159451

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑