Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 4181194 4181478 285 128 [0] [0] 13 gspE general secretory pathway component, cryptic

Only 100 of 128 total aligned reads displayed.

CCCCACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCCA  >  W3110S.gb/4181126‑4181193
                                                                   |
ccctACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1394094/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCTCGAGCGAAAGACATATCca  <  1:300333/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATTTCca  <  1:65091/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:538513/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:668471/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:666115/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:664374/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:66040/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:645498/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:621287/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:600855/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:590769/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:565193/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:560345/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:718966/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:537403/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:535114/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:490709/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:465285/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:46470/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:409006/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:405320/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:399162/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1049037/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:39149/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:864670/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:968876/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:965799/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:963908/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:937586/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:93172/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:931457/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:915575/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:894730/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:890304/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:887025/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:877115/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:673641/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:824946/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:803940/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:785092/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:772855/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:7706/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:756807/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:751429/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:743580/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:72895/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:718997/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:396637/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1326234/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1530124/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1487095/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1486728/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1466329/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1464468/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1433299/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1409943/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1403429/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1399041/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1336519/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1332029/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:359456/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1299730/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1299663/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1286687/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:120611/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1174585/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1153110/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1145589/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1105443/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:109204/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1075539/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1551318/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:372426/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:321455/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:320375/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:269786/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:261289/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:25665/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:255943/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:254643/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:233868/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:213317/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:165024/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1601970/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1585593/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1579766/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1567570/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:156191/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1555703/68‑1 (MQ=255)
ccccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1547469/68‑1 (MQ=255)
ccccACCATGACGACACCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:292923/68‑1 (MQ=255)
ccccACCATAACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:261127/68‑1 (MQ=255)
 cccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1350711/67‑1 (MQ=255)
 cccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:1485186/67‑1 (MQ=255)
 cccACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:701763/67‑1 (MQ=255)
  ccaccaTCACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:708675/66‑1 (MQ=255)
    accaTGTCGACATCCGGGTCCTGGCGAAGTATGGCGCGGAGGCCGCGAGCGAAAGACATATCca  <  1:524775/64‑1 (MQ=255)
                               aGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:54585/37‑1 (MQ=255)
                                gTATGGCGCGCAGGCCGCGAGCGAAAGACATATCca  <  1:761640/36‑1 (MQ=255)
                                                                   |
CCCCACCATGACGACATCCGGGTCCTGGCGAAGTATGGCGCGCAGGCCGCGAGCGAAAGACATATCCA  >  W3110S.gb/4181126‑4181193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑