Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4376065	4376252	188	30 [0]	[0] 128	groL	Cpn60 chaperonin GroEL, large subunit of GroESL

CACTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTA  >  W3110S.gb/4376006‑4376064                                                           | caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:357347/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:990301/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:965076/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:902099/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:892827/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:885073/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:831923/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:763133/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:762543/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:72748/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:653826/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:573443/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:452653/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:387149/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1008549/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:173709/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1600246/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1592798/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:15354/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1484867/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1447309/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1408406/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1376700/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1305156/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1142880/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:111010/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1075135/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACATGAAACGTGGTa  >  1:549808/1‑59 (MQ=255) caCTGAAGGTCTGAAAGCTGTTGCTGCCGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1605756/1‑59 (MQ=255) aaCTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTa  >  1:1285863/2‑59 (MQ=255)                                                           | CACTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTA  >  W3110S.gb/4376006‑4376064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑