Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4551009	4551075	67	49 [0]	[0] 154	fimD	outer membrane usher protein, type 1 fimbrial synthesis

CGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAATAT  >  W3110S.gb/4550940‑4551008                                                                     | cgcAGCAGGAAAAAACCCGCTTTTTCTAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1129319/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:670682/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:285631/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:302272/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:3255/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:354459/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:361141/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:372918/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:424687/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:518117/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:549886/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:587503/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:628657/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:641459/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:214557/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:769283/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:833049/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:87331/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:879705/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:909884/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:941537/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:958438/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:977859/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:982687/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:982897/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1447285/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1050610/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1127544/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1137917/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1218856/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1268974/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1274401/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1296950/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1341181/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1368851/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1386437/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1387579/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:25571/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1462009/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1482485/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1482621/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:153562/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1548515/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1556843/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1569844/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1590976/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:183684/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:186016/1‑69 (MQ=255) cgcAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAatat  >  1:1026915/1‑69 (MQ=255)                                                                     | CGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAATAT  >  W3110S.gb/4550940‑4551008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑