Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4552652	4552930	279	43 [0]	[0] 51	fimF	minor component of type 1 fimbriae

AACGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCA  >  W3110S.gb/4552583‑4552651                                                                     | aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:69697/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:291566/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:319037/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:379924/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:400620/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:532477/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:610104/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:640474/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:642605/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:678032/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:114803/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:717532/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:806399/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:835539/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:839602/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:855377/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:876207/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:923343/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:927866/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:933316/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1165633/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1222926/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1293704/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1293942/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1329474/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1175913/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1330437/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1396361/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1405597/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1410726/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1424496/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1102677/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1530739/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1570472/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1575396/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:158757/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:189006/69‑1 (MQ=255) aaCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGGCa  <  1:549914/69‑1 (MQ=255)  aCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:999345/68‑1 (MQ=255)  aCGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:809554/68‑1 (MQ=255)        cgAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1487902/62‑1 (MQ=255)         gAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:1604838/61‑1 (MQ=255)               aTTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCa  <  1:649566/55‑1 (MQ=255)                                                                     | AACGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCA  >  W3110S.gb/4552583‑4552651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑