Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	542582	542865	284	60 [0]	[0] 89	ylbA	conserved hypothetical protein

TCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGCCC  >  W3110S.gb/542514‑542581                                                                    | tCGAGTAAATATAGCTGACCGCTTCCCCACGCCCTACCCCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1198538/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCCCCACGCCCTACACCATACCCAGCCTGTAAAGAATAAGCGccc  >  1:568236/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACGACGCCATACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1063674/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCGTAACCAGCCTGTAAAGAATAAGCGccc  >  1:1453901/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:470910/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:561311/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:556705/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:526495/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:522862/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:513180/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:501787/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:334444/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:432783/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:415600/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:404650/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:389097/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:371381/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:272183/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:567307/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:578016/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:60965/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:611923/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:641640/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:693818/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:741645/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:751875/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:775476/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:787838/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:790169/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:813308/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:930556/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:935665/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1358190/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1032283/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1080714/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1083070/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1122540/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:113707/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1195601/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1200804/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1240388/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1273239/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1287887/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1294722/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1327653/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1331561/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:286210/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1379316/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1386123/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1478482/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1480127/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1504912/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1512667/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1539995/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1572591/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:163051/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:181945/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:198312/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:263741/1‑68 (MQ=255) tCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGccc  >  1:1009099/1‑68 (MQ=255)                                                                    | TCGAGTAAATATAGCTGAACGCTTCACCACGCCCTACACCATAACCAGCCTGTAAAGAATAAGCGCCC  >  W3110S.gb/542514‑542581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑