Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	782617	782927	311	61 [0]	[0] 92	nadA	quinolinate synthase, subunit A

AAAGCGTATTACCGCGAGAAGATAAAACGTCTGCT  >  W3110S.gb/782582‑782616                                   | aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:637283/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:28752/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:305324/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:337780/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:342791/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:354342/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:366310/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:372114/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:392609/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:436352/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:437399/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:48462/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:580281/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:598906/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:632447/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:275409/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:64372/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:680103/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:687954/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:740241/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:779413/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:831480/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:850561/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:86858/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:873728/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:932809/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:963723/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:96543/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:978789/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:993099/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1451139/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1092848/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:111816/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1161139/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1184672/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1238824/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1259957/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1271827/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1281879/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1289393/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1303052/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1304947/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1326643/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1352597/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1352607/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1401751/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1087153/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1464720/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1467304/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1473532/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:14821/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1507740/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1521982/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1540663/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:1546738/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  <  1:1551900/35‑1 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:194413/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:206317/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:218719/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTGCt  >  1:224674/1‑35 (MQ=255) aaaGCGTATTACCGCGAGAAGATAAAACGTCTCCt  >  1:335106/1‑35 (MQ=255)                                   | AAAGCGTATTACCGCGAGAAGATAAAACGTCTGCT  >  W3110S.gb/782582‑782616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑