Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	19600	19779	180	56 [0]	[0] 86	[nhaR]	[nhaR]

GCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCTT  >  W3110S.gb/19554‑19599                                              | gCACCCGGCGGTACAGCGAATCTGCAATATGGATTATTCTGCGCtt  >  1:113288/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:6563/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:186993/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:219609/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:277939/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:288930/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:353278/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:372583/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:475292/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:490957/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:547036/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:563398/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:58341/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:583719/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:587919/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:645174/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:164299/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:699625/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:705903/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:754806/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:808188/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:855436/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:915264/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:918534/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:932407/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:935751/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:988959/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:995204/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:999980/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1281275/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:105812/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1089777/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1099326/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:110450/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1139218/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1143874/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1157604/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1194724/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1205362/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:121734/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1244511/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1264861/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1278486/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:104141/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1295355/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1350963/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1415111/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1428056/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1474426/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1500390/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:154722/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1556104/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:156008/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1578218/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:1580753/1‑46 (MQ=255) gCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCtt  >  1:163496/1‑46 (MQ=255)                                              | GCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCTT  >  W3110S.gb/19554‑19599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑