Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1009064	1010119	1056	87 [0]	[0] 52	ycbY	predicted methyltransferase

CAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGG  >  W3110S.gb/1008995‑1009063                                                                     | cAAAGTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:429209/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:320417/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:444603/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:425157/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:41764/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:381188/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:379971/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:372123/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:336227/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:33474/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:518700/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:307908/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:23402/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:219181/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:206167/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:183185/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1586476/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1550513/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1530070/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:627067/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:972221/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:939850/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:930177/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:826713/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:75873/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:756218/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:675632/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:669685/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:669058/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1033582/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:602179/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:597604/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:56300/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:553507/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:539196/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:520028/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:5200/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:519045/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1132667/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1333614/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1330915/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1325813/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1305898/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1529383/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:127989/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1262678/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1239607/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1165310/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1302046/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1112766/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1103257/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1066136/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1051747/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1045810/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1043202/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1037015/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1022224/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1343273/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1525949/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:151466/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1511709/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1508551/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1459193/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1448768/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1435652/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:14248/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1346298/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1339663/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1357659/69‑1 (MQ=255) cAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1409435/69‑1 (MQ=255) aaaaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:831438/68‑1 (MQ=255)  aaaCTCGCGCCCGTAAAGGCCTGGCTGTGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:698226/68‑1 (MQ=255)  aaaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1543526/68‑1 (MQ=255)  aaaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:618173/68‑1 (MQ=255)  aaaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1161180/68‑1 (MQ=255)  aaaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:636777/68‑1 (MQ=255)  aaaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:834478/68‑1 (MQ=255)  aaaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1534897/68‑1 (MQ=255)  aaaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:164547/68‑1 (MQ=255)  aaaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:367136/68‑1 (MQ=255)  aaaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1560563/68‑1 (MQ=255)  aaaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1238048/68‑1 (MQ=255)   aaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1248981/67‑1 (MQ=255)   aaCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1195232/67‑1 (MQ=255)            ccGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg  <  1:1475378/58‑1 (MQ=255)                     ccTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGacggacgg  <  1:560211/49‑1 (MQ=255)                           tGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACTCACgg  <  1:122126/43‑1 (MQ=255)                                                                     | CAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGG  >  W3110S.gb/1008995‑1009063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑