Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1101217	1101606	390	75 [0]	[0] 64	csgG	outer membrane lipoprotein

GTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTG  >  W3110S.gb/1101148‑1101216                                                                     | gTTCTGCTTTATTTTGCATATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:460943/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGCCCCCTg  >  1:951652/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:400860/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:608371/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:595736/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:580542/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:549293/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:540270/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:52960/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:516896/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:415272/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:653752/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:399483/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:366470/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:365788/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:359886/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:345014/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:329414/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:296577/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:869893/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:9991/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:974795/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:972209/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:946621/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:938856/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:915656/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:903687/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:896007/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:641713/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:867064/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:866625/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:791034/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:787252/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:7544/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:695217/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:690032/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:272988/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1183518/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1001381/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1393422/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1386940/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1313687/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:128509/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1275070/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1257864/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1246331/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1203460/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1402926/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1153210/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1148268/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1146467/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1102656/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1055703/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1041064/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1023370/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1016889/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:188020/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:249461/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:239656/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:227983/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:219985/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:215592/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1423846/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:167746/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:159849/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1588136/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1539976/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1539734/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1522399/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1440703/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:1427931/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACACCTg  >  1:355397/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATAAATCAGGAAAATGACCCCTg  >  1:1063970/1‑69 (MQ=255) gTTCTGCTTTATTTTGCAAATCCCACAGACAACGGTCGATACCATCATTAATCAGGAAAATGACCCCTg  >  1:231103/1‑69 (MQ=255) gTTCTGATTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCATg  >  1:205152/1‑69 (MQ=255)                                                                     | GTTCTGCTTTATTTTGCAAATCCCACAGACCACGGTCGATACCATCATTAATCAGGAAAATGACCCCTG  >  W3110S.gb/1101148‑1101216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑