Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1130718	1130911	194	77 [1]	[0] 111	mviN	predicted inner membrane protein

AATGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATCTTTA  >  W3110S.gb/1130676‑1130721                                          |     aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:467694/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:613523/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:611385/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:59091/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:555933/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:543693/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:52906/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:510587/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:499027/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:4683/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:641473/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:467238/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:461238/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:4431/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:392970/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:373459/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:369383/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:362012/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1062175/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:844667/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:973119/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:966760/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:964624/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:961645/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:96000/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:896090/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:894861/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:857783/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:855449/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:361731/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:817714/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:799825/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:790231/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:77437/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:771505/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:754055/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:74615/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:712698/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:131438/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1429047/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:142872/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1425527/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1415725/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1414358/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1408337/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1342383/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1326195/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1315982/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1432120/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1270071/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1267410/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1254072/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1245567/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1177691/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:117216/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1163613/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1131432/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1076570/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1584204/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:307835/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:252428/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:195279/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:179695/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:165799/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1596426/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1587678/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1583186/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1536041/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1519924/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1454868/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1453219/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:1447776/42‑1 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1443496/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      >  1:1442826/1‑42 (MQ=255) aaTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCACAAAATCTTTa  >  1:408870/1‑46 (MQ=255)  aTGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATc      <  1:359295/41‑1 (MQ=255)        cGCAGCTTTACTGGCAGATGCGTAAGCAGAAAATc      <  1:456885/35‑1 (MQ=37)                                          |     AATGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATCTTTA  >  W3110S.gb/1130676‑1130721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑