Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1148201	1149285	1085	76 [0]	[0] 25	yceD–[plsX]	yceD,rpmF,[plsX]

CGACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATTG  >  W3110S.gb/1148132‑1148200                                                                     | cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:477198/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1471655/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1492112/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1498820/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1512220/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1010455/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1562527/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1583750/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:18621/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:189903/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:268829/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:29928/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:416543/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:450222/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:456173/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1533622/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:599222/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:633108/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:637595/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:660076/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:673186/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:673773/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:74750/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:751701/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:786630/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:802957/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:857780/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:953372/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:973817/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1426409/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1159763/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1347198/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1287322/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1347467/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1170567/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1096145/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1266228/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1070699/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1036722/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1432283/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1215208/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:147021/69‑1 (MQ=255) cgACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCAACAGATATAGCGTATtg  <  1:1277373/69‑1 (MQ=255) cgACGCCATGGCGAGGGGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1457806/69‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATCTTTTTTTCCATCAGATATAGCGTATtg  <  1:48128/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:499644/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:515573/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1024879/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:633753/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1127714/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:110047/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:679081/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1090983/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1067580/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1036240/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:870229/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:917883/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1416940/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1459575/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1494102/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1496388/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1509007/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1423954/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1571298/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:49941/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:180519/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1372329/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1314783/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:396362/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:418314/68‑1 (MQ=255)  gACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:462699/68‑1 (MQ=255)   aCGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:25519/67‑1 (MQ=255)   aCGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1495044/67‑1 (MQ=255)   aCGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1189417/67‑1 (MQ=255)                      gCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1035303/48‑1 (MQ=255)                          aaaTAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATtg  <  1:1427092/44‑1 (MQ=255)                                                                     | CGACGCCATGGCGAGGTGGAGGCTAAAATAAGTTTAGGCATATTTTTTTCCATCAGATATAGCGTATTG  >  W3110S.gb/1148132‑1148200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑