Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1243286	1243715	430	76 [0]	[0] 175	[cvrA]	[cvrA]

CTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCC  >  W3110S.gb/1243217‑1243285                                                                     | cTTACCCCCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:482922/69‑1 (MQ=255) cTTACCACCCCGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:312799/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAACGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:748473/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:407002/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:142863/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1468112/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1474281/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1483688/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1515295/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1535628/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1578818/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:17476/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:193244/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:214093/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:246200/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1056157/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:425060/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:499124/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:530384/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:556334/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:654010/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:796650/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:904596/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:989320/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:989926/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1391542/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1138142/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1183476/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1131384/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1104035/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1217294/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1279052/69‑1 (MQ=255) cTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1072175/69‑1 (MQ=255) cTTACCACCCAGCAGACAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:718201/69‑1 (MQ=255) cTTACCACCCACCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1240181/69‑1 (MQ=255)  ttACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:868095/68‑1 (MQ=255)  ttACCACCCAGCAGAGAAAAGACCGCTGCAGCAGCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:80433/68‑1 (MQ=255)     ccaccCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1145882/65‑1 (MQ=255)        ccccGCAGACAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:116443/62‑1 (MQ=255)        cccAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1582746/62‑1 (MQ=255)        cccAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:528361/62‑1 (MQ=255)                agaAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1156210/54‑1 (MQ=255)                agaAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:872897/54‑1 (MQ=255)                 gaAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:28541/53‑1 (MQ=255)                 gaAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:949479/53‑1 (MQ=255)                   aaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:66593/51‑1 (MQ=255)                   aaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:643820/51‑1 (MQ=255)                   aaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:673808/51‑1 (MQ=255)                   aaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:598831/51‑1 (MQ=255)                   aaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1045191/51‑1 (MQ=255)                   aaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1076667/51‑1 (MQ=255)                   aaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:777768/51‑1 (MQ=255)                   aaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1376444/51‑1 (MQ=255)                   aaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1302868/51‑1 (MQ=255)                   aaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1212057/51‑1 (MQ=255)                   aaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:384718/51‑1 (MQ=255)                   aaaCACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:349802/51‑1 (MQ=255)                    aaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1213462/50‑1 (MQ=255)                     aGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:61921/49‑1 (MQ=255)                     aGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:659649/49‑1 (MQ=255)                     aGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1335366/49‑1 (MQ=255)                     aGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1178299/49‑1 (MQ=255)                     aGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:633784/49‑1 (MQ=255)                     aGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1273252/49‑1 (MQ=255)                     aGACCGCTGCAGCATCGGGAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:24642/49‑1 (MQ=255)                           cTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:614520/43‑1 (MQ=255)                           cTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:529992/43‑1 (MQ=255)                           cTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:238421/43‑1 (MQ=255)                           cTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1293309/43‑1 (MQ=255)                           cTGCAGCAGCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:902858/43‑1 (MQ=255)                             gcagcaTCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1600087/41‑1 (MQ=255)                                gcaTCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1099949/38‑1 (MQ=255)                                gcaTCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:193921/38‑1 (MQ=255)                                 caTCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:671731/37‑1 (MQ=255)                                 caTCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:440968/37‑1 (MQ=255)                                  aTCGGTAGAGCCGACGATAGCGCCGATTAATAAGcc  <  1:1358524/36‑1 (MQ=255)                                                                     | CTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCC  >  W3110S.gb/1243217‑1243285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑