Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1414041	1414922	882	24 [0]	[1] 37	intR	integrase

AACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCG  >  W3110S.gb/1413999‑1414040                                          | aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:250354/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:987676/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:838313/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:835668/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:72521/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:696258/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:689928/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:64211/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:618473/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:542832/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:453468/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:285811/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:1012678/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:207795/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:1464347/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:1334860/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:1280941/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:1237648/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:1214865/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:1177284/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:1142851/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:1126194/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:111245/42‑1 (MQ=255) aaCAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCg  <  1:1015068/42‑1 (MQ=255)                                          | AACAAAATGCAGTTTTTGCTTTTCGGTTCTGCCGTACTCCCG  >  W3110S.gb/1413999‑1414040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑