Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1659768	1660688	921	60 [0]	[0] 141	[ynfE]	[ynfE]

GTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAG  >  W3110S.gb/1659720‑1659767                                                | gctAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:476142/3‑48 (MQ=255) gatAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:740362/3‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:36814/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:368058/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:406522/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:435250/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:449598/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:450253/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:476141/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:508596/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:510464/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:572576/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:604986/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:675511/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:701123/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:715004/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:755540/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:766434/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:768143/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:795323/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:813441/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:816734/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:82603/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:84034/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:851727/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:872149/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:91671/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:936260/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:972050/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:976135/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1526210/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1018889/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1115304/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1124327/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1179361/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1199935/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1227309/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1233514/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1286610/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1302396/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1415972/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1440375/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1460208/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1495854/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1504959/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1008630/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1531025/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1582550/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1592427/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:1593910/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:166000/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:194438/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:235576/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:23806/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:25096/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:251177/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:264017/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:281109/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:282789/1‑48 (MQ=255) gTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAg  >  1:337679/1‑48 (MQ=255)                                                | GTTAGCGCGCTAAATATTCAATATATAAACTTTTATATAACGATAAAG  >  W3110S.gb/1659720‑1659767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑