Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1729264	1729675	412	78 [0]	[0] 68	[nemA]–[gloA]	[nemA],[gloA]

AGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCG  >  W3110S.gb/1729194‑1729263                                                                       | aGATT‑GGCCGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:975130/69‑1 (MQ=255)  gATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:607991/69‑1 (MQ=255)  gATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:561181/69‑1 (MQ=255)  gATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:100417/69‑1 (MQ=255)  gATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1460493/69‑1 (MQ=255)  gATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1457272/69‑1 (MQ=255)  gATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:787976/69‑1 (MQ=255)  gATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1371242/69‑1 (MQ=255)  gATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1264564/69‑1 (MQ=255)  gATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1147474/69‑1 (MQ=255)  gATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1069453/69‑1 (MQ=255)  gATTGGGCGGGGCGGGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:8548/69‑1 (MQ=255)     tGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1384549/66‑1 (MQ=255)      ggggggggggTGAACCGTATACTGATGCGTTCCGCTAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:53202/65‑1 (MQ=255)      gggCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:872869/65‑1 (MQ=255)      gggCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:319361/65‑1 (MQ=255)       ggCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:255051/64‑1 (MQ=255)       ggCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:973954/64‑1 (MQ=255)       ggCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:556072/64‑1 (MQ=255)       ggCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:731576/64‑1 (MQ=255)        gCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:177116/63‑1 (MQ=255)        gCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:683561/63‑1 (MQ=255)         cGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:485220/62‑1 (MQ=255)         cGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:331562/62‑1 (MQ=255)         cGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:272649/62‑1 (MQ=255)          ggggcgTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:866728/61‑1 (MQ=255)           gggggTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:144816/60‑1 (MQ=255)                tGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:791255/55‑1 (MQ=255)                  aaCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:169984/53‑1 (MQ=255)                  aaCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1148266/53‑1 (MQ=255)                  aaCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:396821/53‑1 (MQ=255)                  aaCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:515904/53‑1 (MQ=255)                  aaCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:57018/53‑1 (MQ=255)                  aaCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1566673/53‑1 (MQ=255)                  aaCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1366743/53‑1 (MQ=255)                  aaCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1311330/53‑1 (MQ=255)                  aaCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1054121/53‑1 (MQ=255)                  aaCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:606590/53‑1 (MQ=255)                  aaCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:149267/53‑1 (MQ=255)                   aCCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1121759/52‑1 (MQ=255)                    ccGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:211962/51‑1 (MQ=255)                    ccGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:438285/51‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCTAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:486973/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:571069/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1185972/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1237336/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1271184/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:586321/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:50048/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:599216/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:496006/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1361503/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:683162/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:394151/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:347521/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1080288/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:295441/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1052919/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1491471/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1543084/50‑1 (MQ=255)                     cGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGATCCg  <  1:758431/50‑1 (MQ=255)                      gTATACTTATGCGTTCCGCTAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1157679/49‑1 (MQ=38)                      gTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:775588/49‑1 (MQ=255)                      gTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:262092/49‑1 (MQ=255)                      gTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1023822/49‑1 (MQ=255)                       tataCTTATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:148061/48‑1 (MQ=255)                           cTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1307284/44‑1 (MQ=255)                                gCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1008238/39‑1 (MQ=255)                                 cGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:968870/38‑1 (MQ=255)                                 cGTGCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:71749/38‑1 (MQ=255)                                   ttCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:414283/36‑1 (MQ=255)                                   ttCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:194490/36‑1 (MQ=255)                                   ttCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1285896/36‑1 (MQ=255)                                   ttCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1209791/36‑1 (MQ=255)                                   ttCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1195808/36‑1 (MQ=255)                                   gtCCGCGAAAAACTACCGCGCCCGTTTCCACGGTCCg  <  1:1512320/36‑1 (MQ=25)                                    tCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:460940/35‑1 (MQ=255)                                    tCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCg  <  1:1381130/35‑1 (MQ=255)                                                                       | AGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA‑CGCGCCCGTTTCCACGGTCCG  >  W3110S.gb/1729194‑1729263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑