Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2098018	2098658	641	89 [0]	[0] 88	hisF	imidazole glycerol phosphate synthase, catalytic subunit with HisF

AGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTC  >  W3110S.gb/2097951‑2098017                                                                   | atgTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:939798/65‑1 (MQ=255) atgTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:464289/65‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:549046/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:726084/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:717554/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:712986/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:711090/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:698411/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:674147/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:604717/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:601282/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:5983/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:556842/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:728712/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:53116/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:527573/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:50874/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:470572/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:463841/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:454339/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:445388/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:425646/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:874037/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:961425/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:941337/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:939358/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:934934/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:913589/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:896265/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:895633/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:892490/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:891636/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1007942/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:847988/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:846643/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:82039/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:805262/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:804639/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:802311/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:780038/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:7783/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:733298/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1252239/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:407076/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1384187/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1376384/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1375371/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1356872/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1347842/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1305684/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1296265/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1285511/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1281249/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1401682/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1190421/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:117656/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1165688/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1149941/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:113783/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1129824/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1127354/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1080208/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1043332/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1000014/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1583533/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:359597/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:355792/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:34121/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:295234/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:286903/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:273465/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:268515/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:176000/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1429663/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1555624/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1524028/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1506089/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1501290/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1498342/67‑1 (MQ=255) aGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1479920/67‑1 (MQ=255) aGGTAAATTCACAGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1544108/67‑1 (MQ=255)  ggTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:850481/66‑1 (MQ=255)  ggTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:498236/66‑1 (MQ=255)  ggTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1396051/66‑1 (MQ=255)  ggTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:1447503/66‑1 (MQ=255)   gTAAATTCAGCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCGATGTCTCGACGTTc  <  1:426438/65‑1 (MQ=255)       aTTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:195126/61‑1 (MQ=255)         tCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGGCGTTc  <  1:810308/59‑1 (MQ=255)            ccGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTc  <  1:629213/56‑1 (MQ=255)                                                                   | AGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTC  >  W3110S.gb/2097951‑2098017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑