Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2254535	2254652	118	82 [0]	[0] 114	nfo	endonuclease IV with intrinsic 3'‑5' exonuclease activity

GAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAGG  >  W3110S.gb/2254468‑2254534                                                                   | gatcAGCTGTGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1253282/64‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCATCTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1423304/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGGAGATTTCAGAAGAgg  <  1:509671/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGTgg  <  1:1153839/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:578019/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:633736/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:572931/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:5695/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:560215/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:545981/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:538663/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:535307/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:534893/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:499042/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:485869/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:413440/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:384459/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:374652/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:366189/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:356453/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:29611/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:260789/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:87208/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:999657/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:996470/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:98185/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:968752/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:96588/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:943659/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:935837/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:935483/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:890704/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:601572/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:847038/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:827258/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:801330/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:766080/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:75437/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:70783/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:701537/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:658484/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:249865/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:12566/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1042538/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1331961/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1316011/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:128963/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1271024/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1267666/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1267589/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1266765/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1261768/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1369302/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1252054/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1239178/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1224682/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1200184/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1176946/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1104210/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1081856/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1067012/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1045881/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1534151/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:247477/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:222741/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:220201/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1576474/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1572576/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1534269/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1395597/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1533672/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1515030/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1496374/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1455576/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1440735/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1408973/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:1401901/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:13961/67‑1 (MQ=255) gAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCCGATGCAGATTTCAGAAGAgg  <  1:180835/67‑1 (MQ=255) gAACAGCT‑‑GGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:79022/65‑1 (MQ=255)  aaCAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:435974/66‑1 (MQ=255)  aaCAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAgg  <  1:225736/66‑1 (MQ=255)                                                                   | GAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAGG  >  W3110S.gb/2254468‑2254534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑