Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 2293505 2293701 197 141 [0] [0] 51 insH/narP IS5 transposase and trans‑activator/DNA‑binding response regulator in two‑component regulatory system with NarQ or NarX

Only 100 of 141 total aligned reads displayed.

TCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAG  >  W3110S.gb/2293437‑2293504
                                                                   |
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGaaccagaaccag  <  1:690788/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGATCCAg  <  1:814374/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:505774/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:672145/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:659313/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:647136/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:64489/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:62456/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:588634/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:584797/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:562451/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:534054/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:723474/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:504829/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:490789/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:488320/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:470361/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:447155/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:43372/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:404067/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:403224/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:354181/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:100580/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:344339/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:849656/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:988123/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:987689/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:969020/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:961113/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:953119/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:933986/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:930123/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:909335/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:894304/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:870694/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:866756/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:716080/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:845662/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:840390/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:813243/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:780049/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:768183/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:756479/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:748330/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:738421/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:733176/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:353161/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1272412/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1460638/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:344316/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1438188/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1418066/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1416442/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1375409/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1342330/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:133332/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1322700/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1295955/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1294650/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1440325/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1244436/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1212803/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1200773/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1183866/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1133999/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1128364/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1111705/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1059629/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1048848/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1046975/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1014370/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:165535/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:32841/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:30320/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:291677/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:287478/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:226681/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:210809/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:182201/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1467236/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1598284/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1558859/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1544715/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:147891/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1490075/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1503487/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1527207/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1530976/68‑1 (MQ=255)
tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1536309/68‑1 (MQ=255)
 cGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:212272/67‑1 (MQ=255)
 cGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:322876/67‑1 (MQ=255)
  gCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1480984/66‑1 (MQ=255)
       ttCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:266779/61‑1 (MQ=255)
        tCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:1377312/60‑1 (MQ=255)
              aCGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:352855/54‑1 (MQ=255)
                gCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:960274/52‑1 (MQ=255)
                  tGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:892027/50‑1 (MQ=255)
                   gTAGCCACCAGAACAGATATTGCGGTACGACAAAGAGAAACAGAACCAg  <  1:974346/49‑1 (MQ=255)
                         accaGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:769223/43‑1 (MQ=255)
                         accaGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg  <  1:562391/43‑1 (MQ=255)
                                                                   |
TCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAG  >  W3110S.gb/2293437‑2293504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑