Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 2320057 2320137 81 174 [0] [0] 56 rcsB DNA‑binding response regulator in two‑component regulatory system with RcsC and YojN

Only 100 of 174 total aligned reads displayed.

GCCTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATC  >  W3110S.gb/2319989‑2320056
                                                                   |
gcCTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:909365/68‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:40104/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:543850/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:531863/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:512893/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:512366/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:480463/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:459482/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:438768/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:432103/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:427858/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:418061/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:416902/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:408020/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:594744/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:395724/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:377327/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:37143/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:361175/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:349878/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:328126/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:321532/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:303721/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:301081/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1000005/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:808683/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:983012/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:971900/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:955577/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:955151/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:944885/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:92571/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:893085/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:8619/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:844570/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:842530/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:818606/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:567945/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:795039/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:790284/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:784306/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:754167/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:703265/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:695535/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:689973/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:667793/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:610376/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:598838/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:299401/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1133175/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:297120/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1266869/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1257929/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1255048/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:124404/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1237844/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1234005/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1224397/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1194464/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1191239/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1162536/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1138232/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1273758/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1129055/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1119074/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:110819/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1102471/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1098287/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1081083/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1072896/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1063930/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1043696/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1037739/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1004233/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1521940/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:264170/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:208815/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:184745/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:177594/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:168333/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1597778/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1588481/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1560759/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1558780/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1554012/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1313196/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1489986/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1482391/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1478598/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1470096/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1458000/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1443492/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1438715/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1378068/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1373224/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1337450/67‑1 (MQ=255)
 ccTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:133200/67‑1 (MQ=255)
       tGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:911634/61‑1 (MQ=255)
                               gaTCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:612301/37‑1 (MQ=255)
                                 tCGCTAAAAAGCTGAACCGCAGTATTAAAACCATc  <  1:1575559/35‑1 (MQ=255)
                                                                   |
GCCTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATC  >  W3110S.gb/2319989‑2320056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑