Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2508305	2508815	511	89 [0]	[0] 55	ypdD	fused predicted PTS enzymes Hpr component, enzyme I component, and enzyme IIA component

TCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCG  >  W3110S.gb/2508236‑2508304                                                                     | tcttatCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1448384/4‑69 (MQ=255) taatatCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:630428/3‑69 (MQ=255) tCATATCGTTGGAGCCGTTACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:108140/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:504241/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:69503/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:672633/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:621355/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:597469/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:587313/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:582344/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:575204/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:514586/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:512297/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:7189/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:497476/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:478843/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:444345/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:440722/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:414153/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:403758/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:395672/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:393121/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:334239/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:831177/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:996862/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:994086/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:973767/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:942910/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:913358/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:912465/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:906582/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:890152/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:862336/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:85709/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:711813/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:816802/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:816017/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:809585/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:799282/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:798842/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:747685/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:741112/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:740774/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:735008/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:303840/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1267568/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1069570/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1426963/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1415692/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1385288/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1343148/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1339912/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1338398/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1300048/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1297212/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1271227/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1447618/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1264954/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1257873/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1199482/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1170069/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1152150/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1119237/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:111391/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1092964/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1087715/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1075188/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1535292/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:266385/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:253682/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:240756/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:236247/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:225135/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:216712/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:214800/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:20661/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:204110/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:181008/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:174464/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:172939/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:16751/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1558776/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1554996/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1538275/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1536835/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:1483978/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGAAGCACACCg  >  1:365357/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATATAGCACACCg  >  1:1325541/1‑69 (MQ=255) tCATATCGTTGGAGCCGATACTGAACAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCg  >  1:650424/1‑69 (MQ=255)                                                                     | TCATATCGTTGGAGCCGATACTGAAGAAATCGACCTCATCGCAGAAGTGGTCGATGATGTAGCACACCG  >  W3110S.gb/2508236‑2508304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑