Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2661347	2661458	112	63 [0]	[0] 41	yfhQ	predicted methyltransferase

AGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCAA  >  W3110S.gb/2661278‑2661346                                                                     | aGCCAGAATCCCGTGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:571031/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTTCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1194980/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTCAACAGACGGCGCaa  <  1:1495145/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:689331/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:728747/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:683183/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:617798/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:598937/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:58346/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:577691/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:540482/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:531329/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:414380/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:406952/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:404468/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:392135/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:331771/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:716994/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:284063/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:736633/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:757397/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:781926/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:788764/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:802169/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:829007/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:880465/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:881998/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:884436/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:949731/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:963329/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:975638/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:9886/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:989787/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1292240/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1025145/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1030247/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1044544/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1046491/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1069399/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1106995/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1146327/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1150942/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1191416/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1210009/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1249840/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1266657/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:128219/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:300454/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1400482/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:140885/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1462410/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:148344/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1495545/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1514435/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1579557/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1587207/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1601615/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:168823/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:191355/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:275623/69‑1 (MQ=255) aGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1023615/69‑1 (MQ=255)  gCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1244446/68‑1 (MQ=255)                    atatTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCaa  <  1:1368956/50‑1 (MQ=255)                                                                     | AGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCACGGGTAAACAGACGGCGCAA  >  W3110S.gb/2661278‑2661346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑