Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2688341	2688430	90	81 [0]	[0] 23	yfhK	predicted sensory kinase in two‑component system

CTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGTTTT  >  W3110S.gb/2688288‑2688340                                                     | cTGACAAATATAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1524730/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:409217/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:577651/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:559202/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:540107/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:471497/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:470169/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:463420/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:460474/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:450006/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:596793/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:385291/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:370488/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:33708/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:334466/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:315157/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:297089/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:295156/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:294857/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1000806/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:857865/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:993875/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:98728/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:982034/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:962601/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:957434/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:951598/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:922733/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:918048/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:912603/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:223024/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:837599/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:81423/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:804622/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:772841/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:762265/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:677300/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:676152/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:644990/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:616262/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1129406/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:203481/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1306738/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1285818/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1270259/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1232010/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1215089/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1208744/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1150071/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1133681/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1308154/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1103757/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1091504/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1062646/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1053842/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1034468/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1013464/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1007135/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1002225/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1478918/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:163629/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1597231/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1575508/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:164886/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1575454/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1566460/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:171278/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:145904/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1374042/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1345697/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1343401/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:184020/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1333888/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1321101/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGcttt  <  1:1530100/53‑1 (MQ=255) cTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATATCGTGtttt  <  1:251865/53‑1 (MQ=255)  tGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:964491/52‑1 (MQ=255)  tGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1481578/52‑1 (MQ=255)  tGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1297368/52‑1 (MQ=255)  tGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:56555/52‑1 (MQ=255)                 gcTGATACGATAGGCTGTTAGCATTATTTCGTGtttt  <  1:1098321/36‑1 (MQ=38)                                                     | CTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTCGTGTTTT  >  W3110S.gb/2688288‑2688340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑