Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2810454	2811115	662	59 [0]	[0] 170	emrA	multidrug efflux system

TGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACAGCAAGCA  >  W3110S.gb/2810385‑2810453                                                                     | tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:722711/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:265735/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:281599/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:291231/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:307691/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:329549/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:350455/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:456368/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:49728/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:517515/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:593420/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:615597/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:617135/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:660393/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:687059/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:211739/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:763845/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:764598/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:786300/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:800722/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:812131/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:829416/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:86953/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:878079/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:886712/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:909132/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:922713/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:934838/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:954487/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:137700/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1008319/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1012142/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1036375/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1114880/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1128330/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1143183/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1218058/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1273604/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1282948/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1283620/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1351828/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1359433/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1002253/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1412923/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1436758/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1445613/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1446135/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1452894/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1479619/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1481446/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1482166/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1483453/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1486671/69‑1 (MQ=255) tGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:209719/69‑1 (MQ=255)  gAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1414024/68‑1 (MQ=255)  gAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1415926/68‑1 (MQ=255)  gAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1252285/68‑1 (MQ=255)  gAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:1596227/68‑1 (MQ=255)              aCTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACagcaagca  <  1:804420/56‑1 (MQ=255)                                                                     | TGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACAGCAAGCA  >  W3110S.gb/2810385‑2810453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑