Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2821106	2821154	49	57 [0]	[0] 26	recX	regulatory protein for RecA

ACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAT  >  W3110S.gb/2821038‑2821105                                                                    | aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGCTAGCCATGTTCAt  >  1:363585/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:674252/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:408115/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:438127/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:453709/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:500587/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:516986/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:526030/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:536300/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:591015/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:591540/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:600114/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:602213/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:653679/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:655929/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:381143/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:677253/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:681413/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:692984/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:757964/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:771219/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:833326/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:841510/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:933512/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:944109/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:985492/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:992523/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:997671/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:998825/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1272267/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1026593/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1036899/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1049555/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1067501/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1082307/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1085995/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1121283/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1158826/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1200686/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1217992/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1235509/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1236364/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:126150/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1011161/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1383730/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1431071/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1440694/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1464269/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:1471310/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:148663/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:189054/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:212714/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:22662/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:247132/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:334626/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAt  >  1:366921/1‑68 (MQ=255) aCCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGACAGCCATGTTCAt  >  1:535622/1‑68 (MQ=255)                                                                    | ACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCGAGATAGCCATGTTCAT  >  W3110S.gb/2821038‑2821105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑