Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3088856	3089138	283	17 [0]	[0] 95	[sprT]–[endA]	[sprT],[endA]

AGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTG  >  W3110S.gb/3088805‑3088855                                                   | aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:1585212/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:916830/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:882505/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:837430/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:762625/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:753449/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:634378/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:444030/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:356830/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:1047239/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:1435813/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:1281926/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:114761/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:1099907/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:1086974/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:108492/51‑1 (MQ=255) aGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTg  <  1:1074921/51‑1 (MQ=255)                                                   | AGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTG  >  W3110S.gb/3088805‑3088855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑