Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	223424	225667–225612	2189–2244	75 [0]	[0] 260	rrsH–alaV	rrsH,ileV,alaV

AGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCGG  >  W3110S.gb/223355‑223423                                                                     | aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:467207/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:553676/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:552806/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:552349/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:539989/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:522201/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:521802/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:50282/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:484175/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:560563/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:456529/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:453750/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:436325/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:379728/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:37508/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:341075/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1045399/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:313791/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:831265/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:991935/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:960681/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:906968/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:906636/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:87555/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:860255/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:842788/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:83385/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:339719/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:826295/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:812548/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:804702/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:789820/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:736801/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:730748/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:729422/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:71541/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1157641/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1269835/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1273733/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1248451/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1172471/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1353979/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1379197/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1381016/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1389260/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1428373/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:149055/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1527982/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1537757/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1598565/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:163770/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:165770/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:16730/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1124893/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:176652/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1120525/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1112543/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:202963/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:224585/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:241191/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:297728/69‑1 (MQ=255) aGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATAAGCgg  <  1:178602/69‑1 (MQ=255) aGCCTGCCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:757716/69‑1 (MQ=255)  gCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1087632/68‑1 (MQ=255)  gCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1100783/68‑1 (MQ=255)  gCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:524402/68‑1 (MQ=255)        cAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:98026/62‑1 (MQ=255)           aCCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:196635/59‑1 (MQ=255)                ccGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1109048/54‑1 (MQ=255)                 cGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1846/53‑1 (MQ=255)                  gCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:171726/52‑1 (MQ=255)                     aGCGATAAAAAAGCAGCAAAAACCTGCACAATGATTAAAAGATGAGCgg  <  1:1321533/49‑1 (MQ=255)                        gATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:1288814/46‑1 (MQ=255)                           aaaaaaGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:465252/43‑1 (MQ=255)                                   agcaAAAACCGGCACAATGATTAAAAGATGAGCgg  <  1:269331/35‑1 (MQ=255)                                                                     | AGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGATTAAAAGATGAGCGG  >  W3110S.gb/223355‑223423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑