Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3194352	3195280	929	83 [0]	[0] 12	rfaE	fused heptose 7‑phosphate kinase and heptose 1‑phosphate adenyltransferase

GTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCG  >  W3110S.gb/3194285‑3194351                                                                   | gTTGCCGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1600228/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCCGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1467260/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGTATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:150555/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATACGAGACGTGCCCGGCg  >  1:1173936/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGCCGTGCCCGGCg  >  1:1070490/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGCCGTGCCCGGCg  >  1:934224/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGCCGTGCCCGGCg  >  1:478353/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:303961/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:531067/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:525857/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:486542/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:485601/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:451821/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:415013/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:366891/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:322365/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:631684/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:277577/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:257118/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:254326/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:24457/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:242863/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:219353/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:211818/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:782885/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1007072/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:986315/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:945914/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:910793/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:903071/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:887691/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:816590/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:808573/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:797579/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:612507/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:75550/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:752691/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:738250/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:733711/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:701066/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:664654/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:659434/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:63410/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:992876/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1232837/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1357228/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1355063/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1319617/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1300971/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1296206/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1289887/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1288280/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1279134/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1241520/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1362838/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:122410/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:120448/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1203947/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1157513/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1130335/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:110626/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1058358/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1055851/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1025230/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1501184/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:168275/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:159067/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1590240/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1531354/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1527784/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1526820/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1518735/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:151849/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1515283/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:17036/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1493464/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1481660/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1477123/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1451071/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1444398/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1436153/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCg  >  1:1390880/1‑67 (MQ=255) gTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGAGCccgccg  >  1:525604/1‑67 (MQ=255)                                                                   | GTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCG  >  W3110S.gb/3194285‑3194351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑