Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3523646	3523945	300	57 [0]	[0] 100	[yiiS]–[yiiR]	[yiiS],[yiiR]

AAAAGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTC  >  W3110S.gb/3523586‑3523645                                                            | aaaaGACTCTGGTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1266932/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACTGTTGTc  <  1:1229126/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:625087/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:379123/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:381386/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:389410/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:424350/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:441642/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:485404/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:526248/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:529328/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:545959/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:562005/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:562672/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:564780/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:571362/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:258773/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:724235/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:72675/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:744649/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:775018/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:787967/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:81531/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:867792/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:891800/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:90749/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:929605/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:966531/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1324345/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1034566/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1042541/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1055466/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1072892/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1118004/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1161890/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1216206/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:128702/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1287090/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1300056/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:100802/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1331910/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1346501/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:137484/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1374894/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1411031/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1537593/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:155033/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1553172/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1585045/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1588653/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:209514/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:24205/60‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACT‑GTACAGTTGTc  <  1:1179048/59‑1 (MQ=255) aaaaGACTCTGCTTCTTCGCGGGGGGCAAAAAAGCGCGAAAACTTACTGGTACAGATGTc  <  1:689059/60‑1 (MQ=255)       gtctGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:690150/53‑1 (MQ=255)        tctGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:45992/53‑1 (MQ=255)                       gTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTc  <  1:1091387/38‑1 (MQ=255)                                                            | AAAAGACTCTGCTTCTTCGCGGGTGGCAAAAAAGCGCGAAAACTTACTGGTACAGTTGTC  >  W3110S.gb/3523586‑3523645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑