Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 3539216 3539786 571 171 [0] [0] 71 [rhaB] [rhaB]

Only 100 of 171 total aligned reads displayed.

TGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGAAA  >  W3110S.gb/3539147‑3539215
                                                                    |
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGTATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1504361/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:489757/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:644895/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:60755/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:607529/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:58731/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:576353/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:565725/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:545048/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:544153/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:52400/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:500504/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:495833/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:645459/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:476368/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:46317/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:456017/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:418632/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:347378/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:345324/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:315159/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:294870/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:291543/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:284344/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:260372/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:78172/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:9555/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:948378/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:946613/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:935655/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:915988/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:90984/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:877378/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:85307/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:837080/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:832652/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:828203/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:102825/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:760436/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:758796/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:756497/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:737914/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:726821/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:723357/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:710809/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:706746/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:694974/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:694911/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:67322/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1197097/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1404157/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1401153/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:247700/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1382450/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:137503/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1322900/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1310133/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1283509/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1268814/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1266039/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1393182/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:119209/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:118678/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1169509/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1132845/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1126488/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1094028/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1068854/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1067866/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1031467/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1011163/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1531730/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1605664/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:168191/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:202467/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1568457/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:205950/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:21377/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:227544/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1550826/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1539148/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1515363/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1496024/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1407507/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1494809/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1479141/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1450707/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1420428/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1417447/69‑1 (MQ=255)
tGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGAATGGTCGTAATGaaa  <  1:13480/69‑1 (MQ=255)
 ggCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:276909/68‑1 (MQ=255)
 ggCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1075578/68‑1 (MQ=255)
 ggCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1571726/68‑1 (MQ=255)
 ggCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1554005/68‑1 (MQ=255)
 ggCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1368862/68‑1 (MQ=255)
   cccATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:771247/66‑1 (MQ=255)
           ccTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1236509/58‑1 (MQ=255)
              gTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:934541/55‑1 (MQ=255)
                  gTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:1585296/51‑1 (MQ=255)
                             gTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGaaa  <  1:81757/40‑1 (MQ=255)
                                                                    |
TGGCCCATTTTCCTGTCAGTAACGAGAAGGTCGCGAATTCAGGCGCTTTTTAGACTGGTCGTAATGAAA  >  W3110S.gb/3539147‑3539215

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑