Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3561525	3561733	209	42 [0]	[0] 12	yihW	predicted DNA‑binding transcriptional regulator

AACGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAG  >  W3110S.gb/3561456‑3561524                                                                     | aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:420291/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1578651/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1020989/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:194983/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:270311/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:287375/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:29518/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:346631/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:382874/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:396914/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:163650/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:508014/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:542501/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:561824/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:573439/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:70541/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:782825/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:908276/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:90841/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:922057/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1564841/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1168855/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1217963/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1234232/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1249736/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1295167/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1295960/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1296914/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1362666/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1386755/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1397475/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1434398/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1467224/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1499879/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1503624/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1504262/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1568969/69‑1 (MQ=255) aaCGCGCCATCGCTCTCAATCCCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:673653/69‑1 (MQ=255)  aCGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:174871/68‑1 (MQ=255)   cgcgCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1560199/67‑1 (MQ=255)                              gCTTGTTACCAGATAATCAGCACGAAAATCAGCCTCAAAg  <  1:320547/40‑1 (MQ=255)                              gCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAg  <  1:1068679/40‑1 (MQ=255)                                                                     | AACGCGCCATCGCTCTCAATCGCCCCAACGCTTGTTACCAGATAATCAGCACGAAAATCAGCCACAAAG  >  W3110S.gb/3561456‑3561524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑