Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3630646	3630896	251	65 [0]	[0] 21	[recQ]	[recQ]

CTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGATTT  >  W3110S.gb/3630580‑3630645                                                                  | cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:437687/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:63690/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:62827/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:617092/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:516879/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:498916/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:468330/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:460549/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:45479/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:641770/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:426187/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:417366/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:408512/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:396163/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:353544/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:321649/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:315726/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:279081/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:652582/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:656368/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:682454/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:741015/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:754975/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:767917/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:778248/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:805545/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:812894/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:823540/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:897922/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:920083/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:947156/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:976697/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:981452/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1279136/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1015716/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1089216/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1157724/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1180352/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1201844/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1203637/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1203985/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1215984/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1220121/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1225863/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1230151/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1235725/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1238028/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1246464/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1264083/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1014219/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1308449/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1356114/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1412061/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1438822/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1452156/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1470452/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1494564/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1518940/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:1528473/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:154801/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:175567/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:179911/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:218895/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:263652/1‑66 (MQ=255) cTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGAttt  >  1:271031/1‑66 (MQ=255)                                                                  | CTTTCATCAACGAAATCAGCGGTGAAACAACCACGGTAAGGCCGTTTAGCAATAAGGCAGGGATTT  >  W3110S.gb/3630580‑3630645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑