Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3644346	3645367	1022	57 [0]	[0] 125	cyaA	adenylate cyclase

CTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAC  >  W3110S.gb/3644290‑3644345                                                        | cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:573645/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1016821/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1481394/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1519183/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1568453/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1571808/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:224761/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:26050/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:300315/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:349133/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:439096/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:446779/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:506552/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:530098/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1461553/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:576528/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:579762/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:592097/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:600123/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:646361/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:716040/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:747675/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:802299/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:815684/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:862968/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:952849/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:977521/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:98136/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1282891/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1018187/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1045351/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1083376/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1090842/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1113126/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:111839/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1152444/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1167128/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1198628/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1231550/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1237737/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1263601/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1435873/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1295649/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:130488/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1306494/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1324534/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1361765/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1382296/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1405155/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1408685/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1410592/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1421958/56‑1 (MQ=255) cTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1425914/56‑1 (MQ=255)  tGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:527588/55‑1 (MQ=255)  tGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1211225/55‑1 (MQ=255)          ggCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:49927/47‑1 (MQ=255)              gagaCGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAc  <  1:1134028/43‑1 (MQ=255)                                                        | CTGCGGACTGGCGGAGACGCTAAGGTTATTGCGACGCGCAAAGCGGATCAGATTAC  >  W3110S.gb/3644290‑3644345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑