Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3704697	3705496	800	44 [0]	[0] 31	[trkD]	[trkD]

CACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATC  >  W3110S.gb/3704628‑3704696                                                                     | cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGGCCCCCGTAATc  <  1:1521230/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:600689/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:318700/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1065499/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:32521/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:350436/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:423726/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:493565/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:507873/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:576280/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:590815/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1178486/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:629742/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:639161/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:683429/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:701467/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:720631/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:722230/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:797411/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:846531/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:905310/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:238098/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1198745/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1226981/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1245555/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1290136/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1299785/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1317957/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1334236/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1355148/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1371216/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1503603/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1518659/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1522694/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1537182/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1575474/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:1585122/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:269571/69‑1 (MQ=255) cACGCCAGGCGAATAGGGAACATACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:964510/69‑1 (MQ=255)   cGCCAGGCGAATATGGAACTTACCAAAGTGCCCCATATCAGCATACAGCTCCTCGACCCCCGTAATc  <  1:1524470/67‑1 (MQ=255)   cGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:697147/67‑1 (MQ=255)              tAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCCACCCCCGTAATc  <  1:73450/56‑1 (MQ=255)                gggAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:320609/54‑1 (MQ=255)                                  cccATATCAGCATACAGCGCCTCGACCCCCGTAATc  <  1:972639/36‑1 (MQ=255)                                                                     | CACGCCAGGCGAATAGGGAACTTACCAAAGTGCCCCATATCAGCATACAGCGCCTCGACCCCCGTAATC  >  W3110S.gb/3704628‑3704696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑