Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3792050	3792383	334	54 [0]	[0] 63	uhpC	membrane protein regulates uhpT expression

CCGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCGG  >  W3110S.gb/3791981‑3792049                                                                     | ccGTAGCGATATCGGCCTGTTAGCGCCCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1466249/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGCCCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1010429/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGCCCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:908915/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGCCCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:943982/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:991241/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:913765/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:44592/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:449027/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:46265/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:49999/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:508652/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:519207/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:543533/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:59959/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:637106/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:639048/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:705560/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:735277/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:423665/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:740383/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:747323/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:762513/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:779436/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:814222/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:81992/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:847879/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:849745/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:881994/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1438970/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1054557/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1068817/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1091156/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:109118/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1103526/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1108490/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1139879/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1202797/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1228469/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1332705/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1367434/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1380319/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:42467/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1472405/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1477309/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1503272/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1503539/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:1586929/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:169231/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:178659/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:190714/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:252786/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:309917/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:336131/1‑69 (MQ=255) ccGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCgg  >  1:361040/1‑69 (MQ=255)                                                                     | CCGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCGG  >  W3110S.gb/3791981‑3792049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑