Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3867460	3867605	146	20 [0]	[0] 44	mtlA	fused mannitol‑specific PTS enzyme IIABC components

TGATTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACG  >  W3110S.gb/3867392‑3867459                                                                    | tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:162342/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:916090/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:4703/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:42224/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:331067/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:247282/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:241827/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:180523/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:1031031/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:1588829/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:1552866/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:1544243/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:1424404/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:1294540/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:119109/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:1138089/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:1071932/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:1041333/68‑1 (MQ=255) tgatTGCCGCACCGCCCGCAGACTGTTTAGCGCGACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:327336/68‑1 (MQ=255)         gCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACg  <  1:241171/60‑1 (MQ=255)                                                                    | TGATTGCCGCACCGCCCGCAGACTGTTTAGCGCTACCACGACCAAAGAACATGTACGCCAGCAGCACG  >  W3110S.gb/3867392‑3867459

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑